OMA group 1095878 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1095878 with 18 members.

Fingerprint: FNGIPKM | non-specific serine/threonine protein kinase

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Members 18

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Oryza glaberrima	ORYGL07880	I1R5B8
E	Oryza nivara	ORYNI10810	A0A0E0J8N4
E	Oryza rufipogon	ORYRU10816	A0A0E0RFL8
E	Oryza sativa subsp. japonica	ORYSJ09661	Q0IP31
E	Aegilops tauschii subsp. strangulata	AEGTS15174	A0A453D3B3
E	Triticum turgidum subsp. durum	TRITD98133	A0A9R1REB7
E	Miscanthus sinensis	MISSI59452	Misin12G239500.v7.1
E	Persea americana	PERAE21558	MRB53_021599
E	Tetracentron sinense	TETSI04721	A0A835DLW2
E	Daucus carota subsp. sativus	DAUCS14339	A0A161Y240
E	Brassica napus	BRANA55457	Q39356
E	Brassica oleracea var. oleracea	BRAOL15077	A0A0D3BAW1
E	Arabidopsis lyrata	ARALY09631	Al_scaffold_0003_121
E	Arabidopsis thaliana	ARATH18957	A0A384KCW1
E	Eutrema salsugineum	EUTSA08944	V4LB40
E	Gossypium hirsutum	GOSHI55746	Gh_D11G2917
E	Gossypium raimondii	GOSRA51460	A0A0D2TQ92
E	Eucalyptus grandis	EUCGR19674	A0A059BLZ9

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