Pairwise Orthologs for ORYGL07880

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ORYGL07880 (I1R5B8)

E Oryza glaberrima | non-specific serine/threonine protein kinase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Physcomitrium patens	PHYPA12008		A9T497
			E	Pinus taeda	PINTA33570		PTA00059296
			E	Oryza nivara	ORYNI10810		A0A0E0J8N4
			E	Oryza rufipogon	ORYRU10816		A0A0E0RFL8
			E	Oryza sativa subsp. japonica	ORYSJ09661		Q0IP31
			E	Triticum turgidum subsp. durum	TRITD98133		A0A9R1REB7
			E	Eragrostis tef	ERATE29601		augustus_masked-scaf
			E	Nelumbo nucifera	NELNU31732		A0A1U8QCS1
			E	Chenopodium quinoa	CHEQI13817		A0A803L582
			E	Helianthus annuus	HELAN04944		A0A251T8U9
			E	Medicago truncatula	MEDTR40273		AES89918
			E	Cajanus cajan	CAJCA03584		A0A151T3Q5
			E	Cannabis sativa	CANSA13588		A0A803QCN4
			E	Prunus persica	PRUPE20150		EMJ14967
			E	Brassica rapa subsp. pekinensis	BRARP14436		M4DE63
			E	Arabidopsis lyrata	ARALY09631		Al_scaffold_0003_121
			E	Gossypium arboreum	GOSAR20740		XP_017640445
			E	Gossypium hirsutum	GOSHI55746		Gh_D11G2917
			E	Citrus clementina	CITCL19818		V4UR15
			E	Aegilops tauschii	AEGTA08781		EMT07322
			E	Aegilops tauschii	AEGTA14899		EMT14830
			E	Aegilops tauschii subsp. strangulata	AEGTS15174		A0A453D3B3
			E	Aegilops tauschii subsp. strangulata	AEGTS15195		XP_040256570
			E	Annona cherimola	ANNCH20435		Anche102Chr5g0010060
			E	Annona cherimola	ANNCH20476		Anche102Chr5g0010910

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