Pairwise Orthologs for TRITD98133

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TRITD98133 (A0A9R1REB7)

E Triticum turgidum subsp. durum (sub-genome A) | non-specific serine/threonine protein kinase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Oryza glaberrima	ORYGL07880		I1R5B8
			E	Oryza sativa subsp. japonica	ORYSJ09661		Q0IP31
			E	Aegilops tauschii	AEGTA08781		EMT07322
			E	Aegilops tauschii subsp. strangulata	AEGTS15195		XP_040256570
			E	Setaria italica	SETIT25871		K3YDM6
			E	Manihot esculenta	MANES14999		cassava4.1_027254m
			E	Prunus persica	PRUPE20150		EMJ14967
			E	Nicotiana tabacum	TOBAC42990		A0A1S3YS52
			E	Nicotiana tabacum	TOBAC48463		A0A1S3ZBH4
			E	Populus trichocarpa	POPTR02046		Potri.010G018200.1.v
			E	Populus trichocarpa	POPTR02110		A0A2K1YMF8
			E	Oryza rufipogon	ORYRU10816		A0A0E0RFL8
			E	Eragrostis tef	ERATE29601		augustus_masked-scaf
			E	Magnolia sinica	MAGSI33159		XP_058071199
			E	Helianthus annuus	HELAN16107		A0A251SKU3
			E	Cucumis sativus	CUCSA01183		A0A0A0LS73
			E	Phaseolus vulgaris	PHAVU12212		V7CA41
			E	Rosa chinensis	ROSCH28225		A0A2P6Q8V1
			E	Arabidopsis thaliana	ARATH18957		A0A384KCW1
			E	Corchorus capsularis	COCAP16756		A0A1R3H0C3
			E	Gossypium hirsutum	GOSHI55746		Gh_D11G2917
			E	Citrus clementina	CITCL19818		V4UR15
			E	Oryza nivara	ORYNI10810		A0A0E0J8N4
			E	Oryza nivara	ORYNI10814		A0A0E0J8N8
			E	Persea americana	PERAE21386		MRB53_021427

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