Pairwise Orthologs for TETSI04721

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TETSI04721 (A0A835DLW2)

E Tetracentron sinense | Uncharacterized protein

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Zea mays	MAIZE00619		A0A1D6ITQ0
			E	Nelumbo nucifera	NELNU22268		A0A1U8Q7X5
			E	Theobroma cacao	THECC23644		A0A061FC33
			E	Eucalyptus grandis	EUCGR19674		A0A059BLZ9
			E	Erythranthe guttata	ERYGU14008		XP_012841701
			E	Erythranthe guttata	ERYGU14011		XP_012841564
			E	Quercus lobata	QUELO35317		A0A7N2LJJ0
			E	Quercus lobata	QUELO19276		A0A7N2L4T7
			E	Prunus dulcis	PRUDU28300		A0A5E4GDA9
			E	Prunus dulcis	PRUDU28296		A0A5E4GDM9
			E	Gossypium arboreum	GOSAR11616		LOC108472298
			E	Gossypium arboreum	GOSAR11618		LOC108472423
			E	Beta vulgaris subsp. vulgaris	BETVV01382		BVRB_9g211830
			E	Cynara cardunculus var. scolymus	CYNCS00613		A0A103Y446
			E	Solanum lycopersicum	SOLLC28509		A0A3Q7HF02
			E	Medicago truncatula	MEDTR14128		G7IK52
			E	Phaseolus angularis	PHAAN02531		A0A0L9VG17
			E	Citrus clementina	CITCL20206		V4WFD7
			E	Oryza glaberrima	ORYGL02632		I1NS91
			E	Oryza glaberrima	ORYGL07880		I1R5B8
			E	Oryza glaberrima	ORYGL18006		I1PPM6
			E	Oryza nivara	ORYNI10810		A0A0E0J8N4
			E	Oryza nivara	ORYNI10814		A0A0E0J8N8
			E	Triticum turgidum subsp. durum	TRITD27491		A0A9R1Q1E3
			E	Triticum turgidum subsp. durum	TRITD65425		TRITD0Uv1G094610

Showing 1 to 25 of 25 rows rows per page