Pairwise Orthologs for PHACI18950

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PHACI18950 (ENSPCIG00000001605.1)

E Phascolarctos cinereus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Emiliania huxleyi CCMP1516	EMIHU10255		R1D0M4
			E	Scyliorhinus torazame	SCYTO07286		A0A401NR29
			E	Chiloscyllium punctatum	CHIPU09707		A0A401SLS0
			E	Lepisosteus oculatus	LEPOC16970		W5NKS7
			E	Anguilla anguilla	ANGAN53319		XP_035254061
			E	Scophthalmus maximus	SCOMX12415		ENSSMAG00000016074.1
			E	Mola mola	MOLML12400		A0A3Q3VMZ5
			E	Takifugu rubripes	TAKRU24288		H2TVL8
			E	Tetraodon nigroviridis	TETNG05475		H3DCK7
			E	Cyprinodon variegatus	CYPVA22569		A0A3Q2CHH1
			E	Poecilia formosa	POEFO21668		A0A087XDN4
			E	Haplochromis burtoni	HAPBU19218		A0A3Q2X1P4
			E	Amphilophus citrinellus	AMPCI24761		A0A3Q0SCD5
			E	Amphiprion percula	AMPPE09275		A0A3P8SP97
			E	Electrophorus electricus	ELEEL45913		A0A4W4GRG3
			E	Ictalurus punctatus	ICTPU05564		ENSIPUG00000016410.1
			E	Danio rerio	DANRE31321		ENSDARG00000059993.7
			E	Latimeria chalumnae	LATCH17045		H3B456
			E	Ornithorhynchus anatinus	ORNAN01071		F6QPM0
			E	Tachyglossus aculeatus	TACAU11674		XP_038608576
			E	Procavia capensis	PROCA09535		ENSPCAG00000004277
			E	Loxodonta africana	LOXAF18088		G3TPJ1
			E	Ochotona princeps	OCHPR03466		ENSOPRG00000000780
			E	Dipodomys ordii	DIPOR18981		A0A1S3G3N4
			E	Fukomys damarensis	FUKDA15442		ENSFDAG00000012887.1

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