Pairwise Orthologs for LEPOC16970

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene LEPOC16970 (W5NKS7)

E Lepisosteus oculatus | Transient receptor potential cation channel subfam

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO07286		A0A401NR29
			E	Chiloscyllium punctatum	CHIPU09707		A0A401SLS0
			E	Anabas testudineus	ANATE27724		A0A7N6A8C2
			E	Seriola dumerili	SERDU27087		A0A3B4V1A4
			E	Echeneis naucrates	ECHNA48474		A0A665UE05
			E	Cynoglossus semilaevis	CYNSE12992		A0A3P8VYE4
			E	Dicentrarchus labrax	DICLA48330		A0A8P4KMC1
			E	Gasterosteus aculeatus	GASAC07646		G3NMH9
			E	Sparus aurata	SPAAU66328		A0A671Y6H4
			E	Oryzias latipes	ORYLA17178		ENSORLG00000017194
			E	Oryzias melastigma	ORYME16814		A0A3B3C1C1
			E	Kryptolebias marmoratus	KRYMA27103		A0A3Q3APB8
			E	Poecilia reticulata	POERE31016		A0A3P9NFU6
			E	Xiphophorus maculatus	XIPMA09607		M4ASG4
			E	Salarias fasciatus	SALFA23760		A0A672H3M7
			E	Amphiprion ocellaris	AMPOC29502		A0A3Q1CKB1
			E	Amphiprion percula	AMPPE09275		A0A3P8SP97
			E	Gadus morhua	GADMO37931		A0A8C5FSM9
			E	Astyanax mexicanus	ASTMX07347		ENSAMXG00000010092
			E	Pygocentrus nattereri	PYGNA09232		A0A3B4CNI7
			E	Cyprinus carpio carpio	CYPCA24246		A0A8C0Y656
			E	Latimeria chalumnae	LATCH17045		H3B456
			E	Ornithorhynchus anatinus	ORNAN01071		F6QPM0
			E	Tachyglossus aculeatus	TACAU11674		XP_038608576
			E	Procavia capensis	PROCA09535		ENSPCAG00000004277

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