Pairwise Orthologs for CAERE16063

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAERE16063 (E3NC50)

E Caenorhabditis remanei | Uncharacterized protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Actinobacillus pleuropneumoniae serotype 3 (strain JL03)	ACTPJ00535		APJL_0574
			E	Cavenderia fasciculata (strain SH3)	CAVFA08032		F4PJY0
			E	Thecamonas trahens ATCC 50062	THETB08448		A0A0L0DKS3
			E	Coprinopsis cinerea	COPCI17335		fgeneshDR_te_pg.Chr_
			E	Oryzias latipes	ORYLA10431		ENSORLG00000015872
			E	Sinocyclocheilus grahami	SINGR26287		A0A672LAX1
			E	Melopsittacus undulatus	MELUD20810		ENSMUNG00000003069.1
			E	Caenorhabditis briggsae	CAEBR01127		A8WJ68
			E	Caenorhabditis elegans	CAEEL00831		SPD5_CAEEL
			E	Caenorhabditis japonica	CAEJA01236		A0A8R1DGC5
			E	Angiostrongylus costaricensis	ANGCS04717		A0A0R3PJP9
			E	Haemonchus contortus	HAECO12553		A0A7I4YLB3
			E	Bombyx mori	BOMMO11882		A0A8R1WI08
			E	Drosophila elegans	DROEL03503		DELE003504
			E	Exaiptasia diaphana	EXADI13300		A0A913YBI3
			E	Gossypium raimondii	GOSRA43601		A0A0D2NTJ8
			E	Caenorhabditis brenneri	CAEBE07006		G0MF77
			E	Caenorhabditis brenneri	CAEBE17356		G0PBX2
			E	Ectocarpus siliculosus	ECTSI03106		D8LTQ9
			E	Ectocarpus siliculosus	ECTSI07066		D7G811
			A	Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / JCM 9101 / NCIMB 13204 / VKM B-1734 / 4k)	HALTV01599		WP_012942797
			B	Actinobacillus pleuropneumoniae serotype 7 (strain AP76)	ACTP700607		APP7_0625
			E	Cordyceps militaris (strain CM01)	CORMM00376		G3J3P6
			E	Cordyceps militaris (strain CM01)	CORMM01253		G3J428

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