Pairwise Orthologs for CAEBE17356

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAEBE17356 (G0PBX2)

E Caenorhabditis brenneri | CBN-SPD-5 protein [Cbn-spd-5]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Deltaproteobacteria bacterium NP119	U08DE01694		CL920_05455
			E	Leishmania major strain Friedlin	LEIMA05045		Q4Q553
			E	Trypanosoma vivax (strain Y486)	TRYVY04007		ERJ75_000423500
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO305820		CAOG_03258
			E	Ajellomyces capsulatus (strain H143)	AJECH04835		C6HEG8
			E	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	YEAST05247		RAD50_YEAST
			E	Serendipita indica (strain DSM 11827)	SERID04739		G4THG5
			E	Spizellomyces punctatus	SPIPN08204		SPPG_08646
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD09157		A0A0L0H4C3
			E	Scyliorhinus torazame	SCYTO05903		A0A401PEI6
			E	Oryzias melastigma	ORYME10556		A0A3B3CJF8
			E	Poecilia reticulata	POERE29167		A0A3P9PK02
			E	Astyanax mexicanus	ASTMX21464		ENSAMXG00000017034
			E	Procavia capensis	PROCA08710		ENSPCAG00000006457
			E	Macaca fascicularis	MACFA36274		ENSMFAG00000034228.1
			E	Macaca nemestrina	MACNE08484		A0A2K6CKH0
			E	Mandrillus leucophaeus	MANLE06942		A0A2K6AGQ7
			E	Papio anubis	PAPAN32509		A9CB11
			E	Aotus nancymaae	AOTNA00584		A0A2K5BZ30
			E	Callithrix jacchus	CALJA27024		A0A8I3ZYH3
			E	Sus scrofa	PIGXX19713		A0A287AKY6
			E	Canis lupus familiaris	CANLF14077		ENSCAFG00000010707
			E	Dasypus novemcinctus	DASNO12974		ENSDNOG00000002733
			E	Choloepus hoffmanni	CHOHO10867		ENSCHOG00000007659
			E	Falco tinnunculus	FALTI19150		A0A8C4U1V7

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