Pairwise Orthologs for CAEJA01236

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAEJA01236 (A0A8R1DGC5)

E Caenorhabditis japonica | Uncharacterized protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Giardia intestinalis (strain ATCC 50581 / GS clone H7)	GIAIB03130		C6LNW4
			E	Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804)	SAICN00899		A0A0E9N9T0
			E	Gibberella moniliformis (strain M3125 / FGSC 7600)	GIBM711920		W7MZE5
			E	Fusarium oxysporum f. sp. cubense (strain race 1)	FUSC112988		N4U6V9
			E	Capra hircus	CAPHI20591		A0A452E459
			E	Caenorhabditis briggsae	CAEBR01127	1:1	A8WJ68
			E	Caenorhabditis elegans	CAEEL00831	1:1	SPD5_CAEEL
			E	Caenorhabditis remanei	CAERE16063	1:1	E3NC50
			E	Brugia malayi	BRUMA14063		A0A0I9NC18
			E	Haemonchus contortus	HAECO12553		A0A7I4YLB3
			E	Haemonchus placei	HAEPC16172		A0A0N4WWP0
			E	Daphnia pulex	DAPPU13952		E9H5V6
			E	Acromyrmex echinatior	ACREC00507		F4WC40
			E	Chondrus crispus	CHOCR01522		R7QJY3
			E	Caenorhabditis brenneri	CAEBE07006	1:n	G0MF77
			E	Caenorhabditis brenneri	CAEBE17356	1:n	G0PBX2
			E	Angiostrongylus costaricensis	ANGCS04717		A0A0R3PJP9

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