Pairwise Orthologs for AEGTA28364

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene AEGTA28364 (EMT13879)

E Aegilops tauschii

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Aegilops tauschii subsp. strangulata	AEGTS05687		A0A452ZLH7
			E	Triticum aestivum	WHEAT15813		A0A3B5ZYY7
			E	Triticum turgidum subsp. durum	TRITD180910		A0A9R0QGE9
			E	Phaseolus angularis	PHAAN28586		A0A0L9UP48
			E	Triticum urartu	TRIUA29571		TRIUR3_22564
			E	Triticum urartu	TRIUA18275		TRIUR3_23915
			E	Physcomitrium patens	PHYPA05533		PP1S281_17V6
			E	Amborella trichopoda	AMBTC13103		U5CYJ2
			E	Coffea canephora	COFCA04055		A0A068UCI9
			E	Solanum lycopersicum	SOLLC16556		A0A3Q7FNP1
			E	Solanum tuberosum	SOLTU22548		M0ZRU5
			E	Cajanus cajan	CAJCA11086		A0A151SH77
			E	Phaseolus vulgaris	PHAVU18332		V7BX37
			E	Rosa chinensis	ROSCH22592		A0A2P6RXP3
			E	Gossypium hirsutum	GOSHI41404		Gh_D06G0692
			E	Pinus taeda	PINTA05625		PTA00059821
			E	Pinus taeda	PINTA06715		PTA00051119
			E	Pinus taeda	PINTA18222		PTA00012303
			E	Pinus taeda	PINTA19208		PTA00063066
			E	Pinus taeda	PINTA61214		PTA00040398
			E	Pinus taeda	PINTA61601		PTA00055389
			E	Pinus taeda	PINTA64418		PTA00040996
			E	Pinus taeda	PINTA68462		PTA00002389
			E	Pinus taeda	PINTA71852		PTA00002958
			E	Pinus taeda	PINTA73587		PTA00013814

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