Pairwise Orthologs for TRIUA18275

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TRIUA18275 (TRIUR3_23915)

E Triticum urartu

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Amborella trichopoda	AMBTC13091		U5D1E9
			E	Oryza punctata	ORYPU30723		A0A0E0LZ14
			E	Aegilops tauschii subsp. strangulata	AEGTS05687		A0A452ZLH7
			E	Triticum aestivum	WHEAT04310		A0A3B5Y4Y7
			E	Triticum turgidum subsp. durum	TRITD179572		A0A9R0QHQ9
			E	Miscanthus sinensis	MISSI87130		MisinT403300.v7.1
			E	Persea americana	PERAE12821		MRB53_012835
			E	Eutrema salsugineum	EUTSA16699		V4KPC6
			E	Taxus chinensis	TAXCH01078		A0AA38LPP9
			E	Asparagus officinalis	ASPOF15590		A0A5P1EUV8
			E	Aegilops tauschii	AEGTA28364		EMT13879
			E	Coffea canephora	COFCA04055		A0A068UCI9
			E	Rosa chinensis	ROSCH20954		A0A2P6RT23
			E	Pinus taeda	PINTA04429		PTA00066424
			E	Pinus taeda	PINTA05625		PTA00059821
			E	Pinus taeda	PINTA06715		PTA00051119
			E	Pinus taeda	PINTA17471		PTA00038641
			E	Pinus taeda	PINTA18222		PTA00012303
			E	Pinus taeda	PINTA19208		PTA00063066
			E	Pinus taeda	PINTA61214		PTA00040398
			E	Pinus taeda	PINTA64418		PTA00040996
			E	Pinus taeda	PINTA68462		PTA00002389
			E	Pinus taeda	PINTA71852		PTA00002958
			E	Pinus taeda	PINTA72241		PTA00049802
			E	Pinus taeda	PINTA73591		PTA00013818

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