Pairwise Orthologs for TUPBE09875

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TUPBE09875 (ENSTBEG00000009979)

E Tupaia belangeri

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cercocebus atys	CERAT14453		A0A2K5MK06
			E	Macaca fascicularis	MACFA34697		ENSMFAG00000003962.1
			E	Macaca mulatta	MACMU35911		A0A1D5Q349
			E	Macaca nemestrina	MACNE07259		A0A2K6AUC9
			E	Mandrillus leucophaeus	MANLE16904		A0A2K5Y6Z7
			E	Papio anubis	PAPAN28357		A0A8I5NU77
			E	Colobus angolensis palliatus	COLAP14111		A0A2K5IM48
			E	Pan paniscus	PANPA31058		A0A2R9CCQ7
			E	Pongo abelii	PONAB27500		H2PEE5
			E	Aotus nancymaae	AOTNA24933		A0A2K5DW43
			E	Carlito syrichta	CARSF28037		ENSTSYG00000007571.2
			E	Canis lupus familiaris	CANLF04299		GLPA_CANLF
			E	Vulpes vulpes	VULVU30797		ENSVVUG00000009111.1
			E	Equus caballus	HORSE28243		F6YPM7
			E	Homo sapiens	HUMAN77542		ENSG00000250361.9
			E	Homo sapiens	HUMAN77543		A0A0C4DFT7
			E	Pan troglodytes	PANTR34561		H2RAS0
			E	Pan troglodytes	PANTR34566		H2RAS3

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