Pairwise Orthologs for PANPA31058

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PANPA31058 (A0A2R9CCQ7)

E Pan paniscus | Glycophorin [GYPA]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU13942		XP_038611345
			E	Cercocebus atys	CERAT14453		A0A2K5MK06
			E	Chlorocebus sabaeus	CHLSB16699		A0A0D9S169
			E	Macaca fascicularis	MACFA34697		ENSMFAG00000003962.1
			E	Macaca mulatta	MACMU35911		A0A1D5Q349
			E	Macaca nemestrina	MACNE07259		A0A2K6AUC9
			E	Mandrillus leucophaeus	MANLE16904		A0A2K5Y6Z7
			E	Papio anubis	PAPAN28357		A0A8I5NU77
			E	Colobus angolensis palliatus	COLAP14111		A0A2K5IM48
			E	Rhinopithecus bieti	RHIBE31306		A0A2K6LM44
			E	Gorilla gorilla gorilla	GORGO31091		G3RHP3
			E	Homo sapiens	HUMAN77543		A0A0C4DFT7
			E	Pan troglodytes	PANTR34566		H2RAS3
			E	Pongo abelii	PONAB27500		H2PEE5
			E	Nomascus leucogenys	NOMLE33824		A0A2I3GA32
			E	Callithrix jacchus	CALJA28333		F6UE75
			E	Cebus imitator	CEBIM02152		A0A2K5S108
			E	Saimiri boliviensis boliviensis	SAIBB13495		A0A2K6UCL0
			E	Tupaia belangeri	TUPBE09875		ENSTBEG00000009979
			E	Equus caballus	HORSE28243		F6YPM7

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