Pairwise Orthologs for TIGCA05564

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TIGCA05564 (A0A553N8T2)

E Tigriopus californicus | Golgi apparatus membrane protein TVP23 homolog

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Armillaria gallica	ARMGA03818		A0A2H3E003
			E	Armillaria ostoyae	ARMOS08591		A0A284RB53
			E	Coniophora puteana (strain RWD-64-598)	CONPW00674		A0A5M3N5L3
			E	Gonapodya prolifera (strain JEL478)	GONPJ08882		A0A139AAA2
			E	Rhizophagus irregularis (strain DAOM 197198w)	RHIIW16108		A0A015J0H9
			E	Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638)	CONC203246		A0A137PA37
			E	Papio anubis	PAPAN23267		A0A8I5NL56
			E	Homo sapiens	HUMAN31898		TV23C_HUMAN
			E	Podarcis muralis	PODMU02571		A0A670J745
			E	Lytechinus variegatus	LYTVA21538		XP_041473610
			E	Trichinella spiralis	TRISP14405		EFV57282
			E	Lepeophtheirus salmonis	LEPSM02096		EMLSAG00000012130
			E	Echinococcus multilocularis	ECHMU09710		A0A068YG53
			E	Schistosoma mansoni	SCHMA06992		A0A3Q0KGA1
			E	Ichthyophthirius multifiliis	ICHMU04212		G0R411
			E	Ichthyophthirius multifiliis (strain G5)	ICHMG03849		G0R411
			E	Tetrahymena thermophila (strain SB210)	TETTS04541		EAS00938
			E	Stylonychia lemnae	STYLE18384		A0A078A1N9
			E	Phaeodactylum tricornutum (strain CCAP 1055/1)	PHATC08450		EEC49900
			E	Phytophthora parasitica	PHYPR06148		W2H9Y9
			E	Phytophthora parasitica (strain INRA-310)	PHYPN12360		W2H9Y9
			E	Ginkgo biloba	GINBI06864		evm.TU.chr11.1415
			E	Allomyces macrogynus (strain ATCC 38327)	ALLM312228		A0A0L0SSV0
			E	Allomyces macrogynus (strain ATCC 38327)	ALLM319436		A0A0L0TFF0
			E	Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500)	POLPP02608		D3BIR5

Showing 1 to 25 of 25 rows rows per page