Pairwise Orthologs for HUMAN31898

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN31898 (TV23C_HUMAN)

E Homo sapiens | Golgi apparatus membrane protein TVP23 homolog C [TVP23C]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)	CHAGB02441		Q2HAH3
			E	Echinops telfairi	ECHTE06035		ENSETEG00000002624
			E	Gorilla gorilla gorilla	GORGO34180		G3R2F9
			E	Tursiops truncatus	TURTR09769		ENSTTRG00000017187
			E	Erinaceus europaeus	ERIEU06440		ENSEEUG00000012679
			E	Choloepus hoffmanni	CHOHO03363		ENSCHOG00000008285
			E	Falco tinnunculus	FALTI20781		A0A8C4XQ42
			E	Romanomermis culicivorax	ROMCU03934		A0A915HV71
			E	Tigriopus californicus	TIGCA05564		A0A553N8T2
			E	Paramecium octaurelia	PAROT23574		A0A8S1VS64
			E	Paramecium primaurelia	PARPR22861		A0A8S1N1C1
			E	Paramecium tetraurelia	PARTE18674		A0DVU4
			E	Paramecium tetraurelia	PARTE17593		A0E099
			E	Entamoeba invadens IP1	ENTIV10118		XP_004184545
			E	Naegleria gruberi strain NEG-M	NAEGR00350		D2V4T7
			E	Diacronema lutheri	DIALT09811		A0A8J5X538
			E	Anaeramoeba ignava	ANAIG02238		A0A9Q0LU80
			E	Trichomonas vaginalis G3	TRIVA25128		A2F8W3
			E	Pneumocystis murina (strain B123)	PNEMU01241		M7PMK4
			E	Dactylellina haptotyla (strain CBS 200.50)	DACHA05142		S8AJ71
			E	Arthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491)	ARTOA02602		A0A7C8VEH6
			E	Pyronema omphalodes (strain CBS 100304)	PYROM05102		U4LF04
			E	Tuber melanosporum (strain Mel28)	TUBMM05369		D5GJ60
			E	Aspergillus brasiliensis (strain CBS 101740 / IMI 381727 / IBT 21946)	ASPBC04091		A0A1L9USB6
			E	Aspergillus novofumigatus (strain IBT 16806)	ASPN106989		A0A2I1C4D3

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