Pairwise Orthologs for PROCA05439

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene PROCA05439 (ENSPCAG00000008457)

E Procavia capensis

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Magnaporthiopsis poae (strain ATCC 64411 / 73-15)	MAGP605374		A0A0C4DZZ4
			E	Magnaporthe grisea	MAGGR00480		MGG_13291
			E	Trametes pubescens	TRAPU10111		A0A1M2W1M8
			E	Echeneis naucrates	ECHNA48137		A0A665TXX7
			E	Cynoglossus semilaevis	CYNSE13030		A0A3P8VVR9
			E	Loxodonta africana	LOXAF10198		G3TBX2
			E	Echinops telfairi	ECHTE04976		ENSETEG00000020000
			E	Dipodomys ordii	DIPOR04365		ENSDORG00000000961.2
			E	Fukomys damarensis	FUKDA21138		A0A091E0E7
			E	Heterocephalus glaber	HETGA27831		ENSHGLG00100000137.1
			E	Cavia aperea	CAVAP12967		ENSCAPG00000013973.1
			E	Cavia porcellus	CAVPO17527		H0VLQ1
			E	Chinchilla lanigera	CHILA12752		A0A8C2YUG3
			E	Octodon degus	OCTDE12663		ENSODEG00000018014.1
			E	Jaculus jaculus	JACJA06821		A0A8C5L3V3
			E	Cricetulus griseus	CRIGR13051		G3HLZ5
			E	Mus musculus	MOUSE04469		AOC3_MOUSE
			E	Nannospalax galili	NANGA15490		A0A8C6W600
			E	Ictidomys tridecemlineatus	ICTTR18787		ENSSTOG00000012633
			E	Cercocebus atys	CERAT29740		A0A2K5P3F7
			E	Macaca mulatta	MACMU14658		A0A1D5QES5
			E	Macaca nemestrina	MACNE31098		A0A2K6B0U9
			E	Papio anubis	PAPAN13677		A0A096P5W2
			E	Rhinopithecus bieti	RHIBE38319		A0A2K6M1J8
			E	Rhinopithecus roxellana	RHIRO27885		A0A2K6P097

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