Pairwise Orthologs for CYNSE13030

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CYNSE13030 (A0A3P8VVR9)

E Cynoglossus semilaevis | Amine oxidase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Mycolicibacterium chubuense	MYCCU04022		KMO84866
			B	Mycolicibacterium gilvum (strain DSM 45189 / LMG 24558 / Spyr1)	MYCSR02299		Mspyr1_24430
			B	Mycolicibacterium gilvum (strain PYR-GCK)	MYCGI03040		Mflv_3126
			B	Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764)	SACES03405		BN6_34440
			E	Emiliania huxleyi CCMP1516	EMIHU07552		R1EFK5
			E	Aspergillus carbonarius (strain ITEM 5010)	ASPC509056		A0A1R3RCA4
			E	Aspergillus parasiticus	ASPPA00655		A0A5N6E2W3
			E	Petromyces alliaceus	PETAA08170		A0A5N6FQ77
			E	Metarhizium acridum (strain CQMa 102)	METAQ02351		E9DXK3
			E	Cryphonectria parasitica	CRYPA02621		e_gw1.4.2459.1
			E	Candida albicans (strain SC5314 / ATCC MYA-2876)	CANAL01680		KHC81373
			E	Candida albicans (strain WO-1)	CANAW02234		C4YJR0
			E	Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)	PICST01465		A3LNA9
			E	Candida tenuis	CANTE00979		gwp2.e_gw0.00006.105
			E	Clavispora lusitaniae (strain ATCC 42720)	CLAL405610		C4YCG1
			E	Candida auris	CANAR00185		A0A2H0ZRF3
			E	Chiloscyllium punctatum	CHIPU08061		A0A401SH58
			E	Callorhinchus milii	CALMI47259		A0A4W3GNY3
			E	Lepisosteus oculatus	LEPOC04778		W5N2Y0
			E	Anguilla anguilla	ANGAN54007		A0A9D3RLS5
			E	Anabas testudineus	ANATE27795		A0A3Q1HZ56
			E	Seriola dumerili	SERDU24638		A0A3B4V177
			E	Echeneis naucrates	ECHNA48137		A0A665TXX7
			E	Dicentrarchus labrax	DICLA54166		A0A8C4DNA7
			E	Gasterosteus aculeatus	GASAC07712		G3NQN8

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