Pairwise Orthologs for JACJA20458

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene JACJA20458 (A0A8C5JY49)

E Jaculus jaculus | C-type lectin domain family 4 member E [LOC101597741]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA15499		BL26023
			E	Scyliorhinus torazame	SCYTO16560		A0A401PYH9
			E	Anabas testudineus	ANATE15771		ENSATEG00000006571.1
			E	Gasterosteus aculeatus	GASAC11080		G3P102
			E	Takifugu rubripes	TAKRU01055		A0A674MVB9
			E	Oryzias javanicus	ORYJA21211		ENSOJAG00000004787.1
			E	Oreochromis aureus	OREAU49051		A0A668TXQ0
			E	Amphiprion percula	AMPPE04699		A0A3P8RUE1
			E	Astyanax mexicanus	ASTMX22847		ENSAMXG00000003068
			E	Tachyglossus aculeatus	TACAU26641		XP_038623980
			E	Procavia capensis	PROCA00826		ENSPCAG00000013671
			E	Loxodonta africana	LOXAF14129		G3TN20
			E	Echinops telfairi	ECHTE01723		ENSETEG00000001234
			E	Oryctolagus cuniculus	RABIT12344		G1SWQ7
			E	Ochotona princeps	OCHPR02287		ENSOPRG00000014243
			E	Dipodomys ordii	DIPOR19467		ENSDORG00000004998.2
			E	Fukomys damarensis	FUKDA20233		ENSFDAG00000004439.1
			E	Heterocephalus glaber	HETGA08453		G5CAT3
			E	Cavia porcellus	CAVPO12868		A0A286X7G8
			E	Chinchilla lanigera	CHILA04281		A0A8C2VWD4
			E	Octodon degus	OCTDE25420		ENSODEG00000001647.1
			E	Cricetulus griseus	CRIGR20261		A0A8C2QLK5
			E	Mus musculus	MOUSE47852		CLC4E_MOUSE
			E	Rattus norvegicus	RATNO30336		A6ILH3
			E	Nannospalax galili	NANGA05194		A0A8C6QQX2

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