Pairwise Orthologs for GASAC11080

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GASAC11080 (G3P102)

E Gasterosteus aculeatus | C-type lectin domain-containing protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cynoglossus semilaevis	CYNSE10730		A0A3P8V1M4
			E	Oryzias javanicus	ORYJA41087		ENSOJAG00000018943.1
			E	Fukomys damarensis	FUKDA20233		ENSFDAG00000004439.1
			E	Octodon degus	OCTDE25420		ENSODEG00000001647.1
			E	Jaculus jaculus	JACJA20458		A0A8C5JY49
			E	Sarcophilus harrisii	SARHA10416		ENSSHAG00000016438
			E	Junco hyemalis	JUNHY02642		A0A8C5JBV8
			E	Varanus komodoensis	VARKO27715		A0A8D2LJG0
			E	Xenopus laevis	XENLA14057		A0A974DGL3
			E	Patiria miniata	PATMI09337		A0A913ZNU9
			E	Caenorhabditis briggsae	CAEBR12785		A0AAE9CYX1
			E	Lingula unguis	LINUN08541		g25055
			E	Bulinus truncatus	BULTR14036		LOTGIDRAFT_122109
			E	Lottia gigantea	LOTGI04606		V4A947
			E	Hydra vulgaris	HYDVU10675		A0A8B6XHJ6
			B	Rippkaea orientalis (strain PCC 8801)	RIPO103895		PCC8801_4091
			B	Rippkaea orientalis (strain PCC 8802)	RIPO203913		Cyan8802_4130
			E	Scyliorhinus torazame	SCYTO13922		A0A401NGU6
			E	Scophthalmus maximus	SCOMX07427		ENSSMAG00000008786.1
			E	Kryptolebias marmoratus	KRYMA13924		A0A3Q3A439
			E	Poecilia formosa	POEFO03554		A0A087YBD6
			E	Salarias fasciatus	SALFA50131		A0A672FLE1
			E	Salmo salar	SALSA05883		ENSSSAG00000003613.2
			E	Oryctolagus cuniculus	RABIT12344		G1SWQ7
			E	Ochotona princeps	OCHPR02287		ENSOPRG00000014243

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