Pairwise Orthologs for DANRE29145

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DANRE29145 (ENSDARG00000074262.5)

E Danio rerio

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Cyprinus carpio carpio	CYPCA71726		A0A8C1E938
			E	Sinocyclocheilus grahami	SINGR01637		A0A672SAA4
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO301218		A0A0D2WLK7
			E	Branchiostoma floridae	BRAFL29423		A0A9J7N7R8
			E	Branchiostoma lanceolatum	BRALA06147		BL07483
			E	Ochotona princeps	OCHPR02742		ENSOPRG00000001209
			E	Ciona intestinalis	CIOIN00890		F6Z8I7
			E	Ciona savignyi	CIOSA08318		H2Y7D2
			E	Asterias rubens	ASTRU14299		XP_033637868
			E	Acanthaster planci	ACAPL16561		LOC110983577
			E	Patiria miniata	PATMI06370		A0A913ZEQ2
			E	Strongylocentrotus purpuratus	STRPU27516		A0A7M7HKV5
			E	Lytechinus variegatus	LYTVA29774		XP_041483556
			E	Caenorhabditis brenneri	CAEBE10468		G0M7Y3
			E	Caenorhabditis briggsae	CAEBR18830		A0AAE8ZQM3
			E	Caenorhabditis elegans	CAEEL18643		Q95PW9
			E	Caenorhabditis japonica	CAEJA06311		A0A8R1DMZ3
			E	Caenorhabditis remanei	CAERE00345		E3LEM6
			E	Brugia malayi	BRUMA03790		A0A0H5SGS8
			E	Litomosoides sigmodontis	LITSI05326		A0A3P6TFJ4
			E	Loa loa	LOALO13792		A0A1I7VPS4
			E	Onchocerca volvulus	ONCVO11464		A0A2K6VT79
			E	Wuchereria bancrofti	WUCBA04316		A0A183XV24
			E	Thelazia callipaeda	THECL05654		A0A0N5CYX2
			E	Strongyloides ratti	STRRB05471		A0A090L8E5

Showing 1 to 25 of 25 rows rows per page