Pairwise Orthologs for BRALA06147

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BRALA06147 (BL07483)

E Branchiostoma lanceolatum

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Capsaspora owczarzaki (strain ATCC 30864)	CAPO301218		A0A0D2WLK7
			E	Branchiostoma floridae	BRAFL29423		A0A9J7N7R8
			E	Eptatretus burgeri	EPTBU25942		A0A8C4QZ88
			E	Gambusia affinis	GAMAF07894		ENSGAFG00000004720.1
			E	Amphiprion percula	AMPPE20442		A0A3P8TMG5
			E	Hippocampus comes	HIPCM16931		A0A3Q2XXQ8
			E	Gadus morhua	GADMO37142		A0A8C5FKK9
			E	Electrophorus electricus	ELEEL11025		A0A4W4GQX0
			E	Homo sapiens	HUMAN72468		NCK1_HUMAN
			E	Carlito syrichta	CARSF15628		A0A1U7STK4
			E	Tupaia belangeri	TUPBE02604		ENSTBEG00000016132
			E	Vicugna pacos	VICPA08400		ENSVPAG00000003302
			E	Ursus maritimus	URSMA23363		A0A384CR76
			E	Erinaceus europaeus	ERIEU04999		ENSEEUG00000000033
			E	Choloepus hoffmanni	CHOHO06875		ENSCHOG00000000534
			E	Notamacropus eugenii	NOTEU13392		ENSMEUG00000008537
			E	Crocodylus porosus	CROPO03410		A0A7M4G0L9
			E	Haliaeetus leucocephalus	HALLE16905		XP_010573999
			E	Falco tinnunculus	FALTI00464		A0A8C4V0C7
			E	Anas platyrhynchos	ANAPL11026		R0KJB3
			E	Anas platyrhynchos platyrhynchos	ANAPP05899		A0A493TNC8
			E	Meleagris gallopavo	MELGA01540		G1NPP1
			E	Gallus gallus	CHICK06752		F1P4Q4
			E	Phasianus colchicus	PHACC16586		A0A669QWB2
			E	Corvus moneduloides	CORMO14665		A0A8U7MCA6

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