Pairwise Orthologs for CROPO11943

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CROPO11943 (A0A7M4FPW8)

E Crocodylus porosus | Glucosaminyl (N-acetyl) transferase 4 [GCNT4]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL01218		A0A9J7M1Y5
			E	Petromyzon marinus	PETMA06576		S4RCT0
			E	Scyliorhinus torazame	SCYTO19914		A0A401Q1V1
			E	Chiloscyllium punctatum	CHIPU03391		A0A401S3M9
			E	Callorhinchus milii	CALMI34556		A0A4W3JLR8
			E	Lepisosteus oculatus	LEPOC06923		W5NLX0
			E	Anabas testudineus	ANATE10385		A0A3Q1J768
			E	Echeneis naucrates	ECHNA52165		A0A665WZS3
			E	Cynoglossus semilaevis	CYNSE31524		A0A3P8VK26
			E	Dicentrarchus labrax	DICLA30569		A0A8C4ISA6
			E	Gasterosteus aculeatus	GASAC00492		G3N8J5
			E	Sparus aurata	SPAAU14014		A0A671VFH6
			E	Mola mola	MOLML26756		A0A3Q3VMM5
			E	Takifugu rubripes	TAKRU30799		H2UAR1
			E	Tetraodon nigroviridis	TETNG15905		H3BZS1
			E	Nothobranchius furzeri	NOTFU03566		A0A8C6NR55
			E	Kryptolebias marmoratus	KRYMA20994		A0A3Q3AWN8
			E	Gambusia affinis	GAMAF02636		ENSGAFG00000003328.1
			E	Salarias fasciatus	SALFA06309		A0A672GZT3
			E	Amphiprion ocellaris	AMPOC10301		A0A3Q1BE31
			E	Hippocampus comes	HIPCM07929		A0A3Q3D2S6
			E	Gadus morhua	GADMO51072		A0A8C5CD37
			E	Esox lucius	ESOLU38463		A0A3P8ZLW3
			E	Salmo salar	SALSA38322		A0A1S3M6G9
			E	Salmo trutta	SALTR21130		A0A673WHA3

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