Pairwise Orthologs for CAEJA15210

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAEJA15210 (WBGene00134862)

E Caenorhabditis japonica

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Caenorhabditis brenneri	CAEBE05844		G0PDA8
			E	Caenorhabditis briggsae	CAEBR10049		A0AAE9D4C6
			E	Caenorhabditis elegans	CAEEL11217		Q18361
			E	Caenorhabditis remanei	CAERE01340		E3ND82
			E	Loa loa	LOALO05047		A0A1S0U4R7
			E	Wuchereria bancrofti	WUCBA10370		A0A3P7E9F9
			E	Angiostrongylus costaricensis	ANGCS08786		A0A0R3PSW2
			E	Haemonchus contortus	HAECO14118		A0A7I4YQR3
			E	Haemonchus contortus	HAECO14119		A0A7I4YPD3
			E	Haemonchus contortus	HAECO14121		A0A7I4YPX6
			E	Haemonchus contortus	HAECO14120		A0A7I4YNU2
			E	Haemonchus contortus	HAECO14126		A0A7I4YNE6
			E	Haemonchus contortus	HAECO14124		A0A7I5EBH0
			E	Haemonchus contortus	HAECO14122		A0A7I4YRK0

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