Pairwise Orthologs for CAEBR10049

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CAEBR10049 (A0AAE9D4C6)

E Caenorhabditis briggsae | UDP-glucuronosyltransferase | Uncharacterized protein [ugt-21]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Seriola dumerili	SERDU17035		A0A3B4UNH9
			E	Ceratotherium simum simum	CERSS06215		XP_014637072
			E	Caenorhabditis elegans	CAEEL11217		Q18361
			E	Caenorhabditis japonica	CAEJA15210		WBGene00134862
			E	Caenorhabditis remanei	CAERE01340		E3ND82
			E	Bombyx mori	BOMMO03805		BGIBMGA003817-TA
			E	Caenorhabditis brenneri	CAEBE02262		G0PC66
			E	Caenorhabditis brenneri	CAEBE05844		G0PDA8
			E	Monosiga brevicollis	MONBE08484		A9V1Y8
			E	Absidia glauca	ABSGL00047		A0A168QQ69
			E	Rhizopus microsporus	RHIZD02996		A0A1X0S8S8
			E	Salmo salar	SALSA114461		ENSSSAG00000059820.2
			E	Sinocyclocheilus grahami	SINGR39881		A0A672S249
			E	Pongo abelii	PONAB28396		A0A8I5U0T6
			E	Cebus imitator	CEBIM23474		A0A2K5QQE0
			E	Carlito syrichta	CARSF14655		A0A1U7UC60
			E	Balaenoptera musculus	BALMU28049		A0A8C0HZH3
			E	Sorex araneus	SORAR06284		ENSSARG00000002735
			E	Notamacropus eugenii	NOTEU01517		ENSMEUG00000009332
			E	Patiria miniata	PATMI16207		A0A914AAL9
			E	Loa loa	LOALO05047		A0A1S0U4R7
			E	Wuchereria bancrofti	WUCBA10370		A0A3P7E9F9
			E	Angiostrongylus costaricensis	ANGCS08786		A0A0R3PSW2
			E	Haemonchus placei	HAEPC07326		A0A0N4WAD4
			E	Danaus plexippus	DANPL06638		EHJ74272

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