Sequences for HUMAN87905

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN87905 (ARL4A_HUMAN)

E Homo sapiens | ADP-ribosylation factor-like protein 4A [ARL4A]

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Orthologs 226

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 450
Gene information
GO Annotations
Sequences/Isoforms 7
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN87904 reference isoform	200			1	ARL4A_HUMAN
	HUMAN87906	200			1	ARL4A_HUMAN
	HUMAN87907	50			1	C9J7Q9
	HUMAN87908	200			1	ARL4A_HUMAN
	HUMAN87909	200			1	ARL4A_HUMAN
	HUMAN87910	200			1	ARL4A_HUMAN
	HUMAN87905	200			1	ARL4A_HUMAN

Protein Sequence

Download: Fasta

MGNGLSDQTS ILSNLPSFQS FHIVILGLDC AGKTTVLYRL QFNEFVNTVP TKGFNTEKIK    60
VTLGNSKTVT FHFWDVGGQE KLRPLWKSYT RCTDGIVFVV DSVDVERMEE AKTELHKITR   120
ISENQGVPVL IVANKQDLRN SLSLSEIEKL LAMGELSSST PWHLQPTCAI IGDGLKEGLE   180
KLHDMIIKRR KMLRQQKKKR                                               200

cDNA Sequence

Download: Fasta

ATGGGGAATG GGCTGTCAGA CCAGACTTCT ATCCTGTCCA ACCTGCCTTC ATTTCAGTCT    60
TTCCACATTG TTATTCTGGG TTTGGACTGT GCTGGAAAGA CAACTGTCTT ATACAGGCTG   120
CAGTTCAATG AATTTGTAAA TACCGTACCT ACCAAAGGAT TTAACACTGA GAAAATTAAG   180
GTAACCTTGG GAAATTCTAA AACAGTCACT TTTCACTTCT GGGATGTAGG TGGTCAGGAG   240
AAATTAAGGC CACTGTGGAA GTCATATACC AGATGCACAG ATGGCATTGT ATTTGTTGTG   300
GACTCTGTTG ATGTCGAAAG GATGGAAGAA GCCAAAACTG AACTTCACAA AATAACTAGG   360
ATATCAGAAA ATCAGGGAGT CCCTGTACTT ATAGTTGCTA ACAAACAAGA TTTGAGGAAC   420
TCATTGTCAC TTTCAGAAAT TGAGAAATTG TTAGCAATGG GTGAACTGAG CTCATCAACT   480
CCTTGGCATT TGCAGCCTAC CTGTGCAATC ATAGGAGATG GCCTAAAGGA AGGACTTGAG   540
AAACTACATG ATATGATCAT TAAAAGAAGA AAAATGTTGC GGCAACAGAA AAAGAAAAGA   600
TGA                                                                 603