Pairwise Orthologs for HUMAN87910

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN87910 (ARL4A_HUMAN)

E Homo sapiens | ADP-ribosylation factor-like protein 4A [ARL4A]

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This entry is not the isoform used for orthologs inferences, orthologs below are inferred using the entry isoform HUMAN87904.

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Diacronema lutheri	DIALT02540		A0A8J5XY02
			E	Trichomonas vaginalis G3	TRIVA16013		A2EHU8
			E	Enterocytozoon bieneusi (strain H348)	ENTBH01046		B7XJ53
			E	Branchiostoma floridae	BRAFL42967		C3Z6N4
			E	Branchiostoma lanceolatum	BRALA06297		BL08812
			E	Petromyzon marinus	PETMA07840		S4S1P5
			E	Scyliorhinus torazame	SCYTO08903		A0A401PG03
			E	Chiloscyllium punctatum	CHIPU06360		A0A401SC41
			E	Callorhinchus milii	CALMI25450		V9KBH4
			E	Lepisosteus oculatus	LEPOC02750		W5NP91
			E	Anguilla anguilla	ANGAN03419		A0A9D3S9M6
			E	Anabas testudineus	ANATE07458		ENSATEG00000003663.1
			E	Seriola dumerili	SERDU24424		A0A3B4T3V7
			E	Echeneis naucrates	ECHNA25749		A0A665TDX1
			E	Scophthalmus maximus	SCOMX10120		A0A2U9CGN9
			E	Dicentrarchus labrax	DICLA14068		A0A8P4KRE9
			E	Gasterosteus aculeatus	GASAC13792		G3PH52
			E	Sparus aurata	SPAAU57694		A0A671TXW6
			E	Mola mola	MOLML14937		A0A3Q4AGK5
			E	Takifugu rubripes	TAKRU45718		H2T5Q4
			E	Oryzias javanicus	ORYJA39184		ENSOJAG00000020647.1
			E	Oryzias melastigma	ORYME30458		A0A3B3D2I2
			E	Nothobranchius furzeri	NOTFU09018		A0A1A8U2U9
			E	Kryptolebias marmoratus	KRYMA19203		A0A3Q3BCP1
			E	Cyprinodon variegatus	CYPVA21331		A0A3Q2FGZ8

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