OMA group 1390152 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1390152 with 57 members.

Fingerprint: SHRTDSK | domain-containing protein

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Members 57

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Marchantia polymorpha	MARPO04832	A0A1B4Z1K0
E	Ginkgo biloba	GINBI00858	evm.TU.chr1.858
E	Pinus taeda	PINTA76761	PTA00006397
E	Amborella trichopoda	AMBTC25185	W1PIK3
E	Asparagus officinalis	ASPOF02539	A0A5P1FGY5
E	Musa acuminata subsp. malaccensis	MUSAM19254	A0A804JLW5
E	Persea americana	PERAE27708	MRB53_027778
E	Annona cherimola	ANNCH23730	Anche102Chr5g0062420
E	Magnolia sinica	MAGSI08146	XP_058093594
E	Aristolochia fimbriata	ARIFI13603	H6P81_013603
E	Nelumbo nucifera	NELNU36090	A0A1U7ZEU9
E	Macadamia integrifolia	MACIN26757	XP_042516218
E	Macleaya cordata	MACCD14548	A0A200Q0F0
E	Tetracentron sinense	TETSI26522	A0A835D625
E	Beta vulgaris subsp. vulgaris	BETVV06100	BVRB_7g167550
E	Chenopodium quinoa	CHEQI13603	A0A803MLI7
E	Actinidia chinensis var. chinensis	ACTCC01434	A0A2R6P6U0
E	Daucus carota subsp. sativus	DAUCS27718	A0A169WHI9
E	Helianthus annuus	HELAN00163	A0A251TEU7
E	Coffea canephora	COFCA21694	A0A068U8D5
E	Erythranthe guttata	ERYGU08296	XP_012835265
E	Nicotiana attenuata	NICAT03933	A0A1J6ITW3
E	Nicotiana tabacum	TOBAC10747	A0A1S4CAV5
E	Solanum lycopersicum	SOLLC32567	A0A3Q7I2Z5
E	Solanum tuberosum	SOLTU40445	M1BHS4

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