Pairwise Orthologs for SOLTU40445

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SOLTU40445 (M1BHS4)

E Solanum tuberosum | Phototropic-responsive NPH3 family protein [102585851]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Physcomitrium patens	PHYPA20707		EDQ71359
			E	Coffea canephora	COFCA21694		A0A068U8D5
			E	Nicotiana attenuata	NICAT03933		A0A1J6ITW3
			E	Capsicum annuum	CAPAN19595		A0A2G2YS93
			E	Solanum lycopersicum	SOLLC32567		A0A3Q7I2Z5
			E	Quercus lobata	QUELO25071		A0A7N2MPF5
			E	Ricinus communis	RICCO22397		B9S529
			E	Populus trichocarpa	POPTR31043		B9GQH7
			E	Theobroma cacao	THECC02230		A0A061DNC1
			E	Corchorus capsularis	COCAP03870		A0A1R3JRN3
			E	Vitis vinifera	VITVI08860		CBI37309
			E	Macadamia integrifolia	MACIN25932		XP_042514117
			E	Macadamia integrifolia	MACIN26757		XP_042516218
			E	Nicotiana tabacum	TOBAC10747		A0A1S4CAV5
			E	Nicotiana tabacum	TOBAC44973		A0A1S3YYY3
			E	Capitella teleta	CAPTE06985		R7VKU6
			E	Capitella sp. 1	CAPI125436		estExt_fgenesh1_pg.C
			E	Mya arenaria	MYAAR45432		XP_052772980
			E	Mercenaria mercenaria	MERMC29847		XP_045189122
			E	Tegillarca granosa	TEGGR15542		KUTeg_004973
			E	Ostrea edulis	OSTED52529		XP_048748157
			E	Pecten maximus	PECMA26056		XP_033756808
			E	Octopus bimaculoides	OCTBM04281		A0A0L8HCI0
			E	Pomacea canaliculata	POMCA17847		A0A2T7PB77
			E	Biomphalaria glabrata	BIOGL02462		A0A9W3ASE6

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