OMA group 1082116 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1082116 with 34 members.

Fingerprint: NVCQVED | cartilage matrix protein

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Members 34

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Branchiostoma lanceolatum	BRALA00299	BL96569
E	Scyliorhinus torazame	SCYTO19253	A0A401Q1T8
E	Oryzias melastigma	ORYME27245	A0A3B3BTB0
E	Astatotilapia calliptera	ASTCA22881	A0A3P8QI69
E	Cyprinus carpio carpio	CYPCA77173	A0A8C1I2P5
E	Sinocyclocheilus grahami	SINGR55252	A0A672S1S4
E	Nannospalax galili	NANGA24401	A0A8C6QI38
E	Cercocebus atys	CERAT06166	A0A2K5P388
E	Chlorocebus sabaeus	CHLSB09147	A0A0D9S7Z8
E	Macaca fascicularis	MACFA23007	ENSMFAG00000031992.1
E	Macaca mulatta	MACMU22928	A0A5F7ZI37
E	Macaca nemestrina	MACNE01695	A0A2K6BTX8
E	Papio anubis	PAPAN17470	A0A096N497
E	Otolemur garnettii	OTOGA02796	H0XC95
E	Vulpes vulpes	VULVU27346	ENSVVUG00000014610.1
E	Erinaceus europaeus	ERIEU13219	ENSEEUG00000009503
E	Dasypus novemcinctus	DASNO14191	ENSDNOG00000042938
E	Notamacropus eugenii	NOTEU09127	ENSMEUG00000012652
E	Phascolarctos cinereus	PHACI34481	ENSPCIG00000017737.1
E	Haliaeetus leucocephalus	HALLE17454	XP_010574538
E	Falco tinnunculus	FALTI08865	A0A8C4UJ98
E	Meleagris gallopavo	MELGA07805	G1MPW2
E	Gallus gallus	CHICK57155	NP_001025546
E	Strigops habroptila	STRHB12594	A0A672TXZ8
E	Tyto alba	TYTAL15366	XP_009962270

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