Pairwise Orthologs for BRALA00299

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BRALA00299 (BL96569)

E Branchiostoma lanceolatum

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Takifugu rubripes	TAKRU46377		H2TQN1
			E	Tetraodon nigroviridis	TETNG13245		H3D6Z4
			E	Nothobranchius furzeri	NOTFU28738		A0A9D3BKE2
			E	Poecilia formosa	POEFO03791		A0A096LY77
			E	Haplochromis burtoni	HAPBU17244		A0A3Q3C8Z0
			E	Pygocentrus nattereri	PYGNA00823		A0A3B4EHQ8
			E	Danio rerio	DANRE15225		A5WWJ4
			E	Procavia capensis	PROCA09881		ENSPCAG00000016081
			E	Cavia porcellus	CAVPO12212		H0VG85
			E	Rattus norvegicus	RATNO34536		F7FNH3
			E	Ictidomys tridecemlineatus	ICTTR08927		ENSSTOG00000014709
			E	Chlorocebus sabaeus	CHLSB09147		A0A0D9S7Z8
			E	Nomascus leucogenys	NOMLE05236		G1QK56
			E	Callithrix jacchus	CALJA41734		F7IAI8
			E	Cebus imitator	CEBIM03227		A0A2K5R826
			E	Carlito syrichta	CARSF14002		ENSTSYG00000008492.2
			E	Otolemur garnettii	OTOGA02796		H0XC95
			E	Bos indicus x Bos taurus	BOBOX38638		A0A4W2EC72
			E	Capra hircus	CAPHI20100		A0A452DWH4
			E	Sus scrofa	PIGXX29469		ENSSSCG00000022554.2
			E	Balaenoptera musculus	BALMU22556		A0A8B8Z6T7
			E	Ailuropoda melanoleuca	AILME07928		ENSAMEG00000017644
			E	Ursus americanus	URSAM02821		A0A452RUW4
			E	Felis catus	FELCA19740		M3WXX2
			E	Myotis lucifugus	MYOLU14407		G1NV11

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