OMA group 1078061 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1078061 with 119 members.

Fingerprint: WRNKRSP | cadherin-related family member

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Members 119

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Branchiostoma floridae	BRAFL08582	A0A9J7MK33
E	Chiloscyllium punctatum	CHIPU04884	A0A401S7Y8
E	Callorhinchus milii	CALMI02481	A0A4W3HTR5
E	Anguilla anguilla	ANGAN05798	XP_035259195
E	Echeneis naucrates	ECHNA47028	A0A665WTQ2
E	Scophthalmus maximus	SCOMX12691	ENSSMAG00000002468.1
E	Dicentrarchus labrax	DICLA25447	E6ZHK3
E	Sparus aurata	SPAAU31761	A0A671Y6X7
E	Nothobranchius furzeri	NOTFU19745	XP_015818493
E	Kryptolebias marmoratus	KRYMA02415	A0A3Q3ARM9
E	Gambusia affinis	GAMAF06437	ENSGAFG00000004305.1
E	Xiphophorus maculatus	XIPMA00796	M4AK89
E	Salarias fasciatus	SALFA42602	A0A672J402
E	Neolamprologus brichardi	NEOBR10916	A0A3Q4H753
E	Oreochromis aureus	OREAU13018	A0A668V944
E	Oreochromis niloticus	ORENI72750	I3KGI1
E	Amphilophus citrinellus	AMPCI04752	A0A3Q0TC29
E	Salmo salar	SALSA61737	ENSSSAG00000054429.2
E	Salmo trutta	SALTR00180	A0A673VRK5
E	Astyanax mexicanus	ASTMX13395	ENSAMXG00000004348
E	Cyprinus carpio carpio	CYPCA111062	A0A9J7YKS1
E	Sinocyclocheilus grahami	SINGR95480	A0A672KRU5
E	Ornithorhynchus anatinus	ORNAN17084	F6W0Y1
E	Tachyglossus aculeatus	TACAU04052	XP_038600240
E	Procavia capensis	PROCA07174	ENSPCAG00000000727

Showing 1 to 25 of 119 rows rows per page