OMA group 1076408 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1076408 with 158 members.

Fingerprint: RIATKXK | protein tyrosine phosphatase receptor type

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Members 158

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Chiloscyllium punctatum	CHIPU02122	A0A401S003
E	Callorhinchus milii	CALMI24748	A0A4W3IG51
E	Lepisosteus oculatus	LEPOC01192	W5NL70
E	Anguilla anguilla	ANGAN24497	XP_035277396
E	Anabas testudineus	ANATE31735	ENSATEG00000018290.1
E	Seriola dumerili	SERDU02064	A0A3B4TK04
E	Echeneis naucrates	ECHNA30674	A0A665W8V0
E	Cynoglossus semilaevis	CYNSE26927	A0A3P8V0P9
E	Scophthalmus maximus	SCOMX17785	ENSSMAG00000001275.1
E	Dicentrarchus labrax	DICLA17300	XP_051264262
E	Gasterosteus aculeatus	GASAC07072	G3NZD8
E	Sparus aurata	SPAAU62651	A0A671XM45
E	Mola mola	MOLML13594	A0A3Q3WYG4
E	Takifugu rubripes	TAKRU14462	A0A674NE23
E	Tetraodon nigroviridis	TETNG04576	H3C132
E	Oryzias javanicus	ORYJA00771	ENSOJAG00000018213.1
E	Oryzias latipes	ORYLA11406	ENSORLG00000011255
E	Oryzias melastigma	ORYME16602	A0A3B3DZ97
E	Nothobranchius furzeri	NOTFU07346	XP_015803202
E	Kryptolebias marmoratus	KRYMA07556	A0A3Q3GV58
E	Cyprinodon variegatus	CYPVA03225	A0A3Q2CAH0
E	Gambusia affinis	GAMAF01586	ENSGAFG00000002261.1
E	Poecilia formosa	POEFO00218	A0A096M520
E	Poecilia reticulata	POERE18722	A0A3P9NXZ3
E	Xiphophorus maculatus	XIPMA08331	M4AT93

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