Pairwise Orthologs for CHIPU02122

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHIPU02122 (A0A401S003)

E Chiloscyllium punctatum | protein-tyrosine-phosphatase

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA02640		S4RUV8
			E	Scyliorhinus torazame	SCYTO03434		A0A401PMQ0
			E	Callorhinchus milii	CALMI24748		A0A4W3IG51
			E	Lepisosteus oculatus	LEPOC01192		W5NL70
			E	Anabas testudineus	ANATE31735		ENSATEG00000018290.1
			E	Seriola dumerili	SERDU02064		A0A3B4TK04
			E	Echeneis naucrates	ECHNA30674		A0A665W8V0
			E	Cynoglossus semilaevis	CYNSE26927		A0A3P8V0P9
			E	Scophthalmus maximus	SCOMX17785		ENSSMAG00000001275.1
			E	Dicentrarchus labrax	DICLA17300		XP_051264262
			E	Gasterosteus aculeatus	GASAC07072		G3NZD8
			E	Sparus aurata	SPAAU62651		A0A671XM45
			E	Mola mola	MOLML13594		A0A3Q3WYG4
			E	Takifugu rubripes	TAKRU14462		A0A674NE23
			E	Tetraodon nigroviridis	TETNG04576		H3C132
			E	Oryzias javanicus	ORYJA00771		ENSOJAG00000018213.1
			E	Oryzias latipes	ORYLA11406		ENSORLG00000011255
			E	Oryzias melastigma	ORYME16602		A0A3B3DZ97
			E	Nothobranchius furzeri	NOTFU07346		XP_015803202
			E	Kryptolebias marmoratus	KRYMA07556		A0A3Q3GV58
			E	Cyprinodon variegatus	CYPVA03225		A0A3Q2CAH0
			E	Gambusia affinis	GAMAF01586		ENSGAFG00000002261.1
			E	Poecilia formosa	POEFO00217		A0A096LRW3
			E	Poecilia reticulata	POERE18722		A0A3P9NXZ3
			E	Xiphophorus maculatus	XIPMA08331		M4AT93

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