OMA group 1073734 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1073734 with 109 members.

Fingerprint: TCLYPSV | collagen type XI alpha

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Members 109

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Seriola dumerili	SERDU32445	A0A3B4VMF6
E	Echeneis naucrates	ECHNA19267	A0A665UXK2
E	Cynoglossus semilaevis	CYNSE13467	A0A3P8X3Q6
E	Scophthalmus maximus	SCOMX19176	ENSSMAG00000016118.1
E	Dicentrarchus labrax	DICLA37256	XP_051233129
E	Gasterosteus aculeatus	GASAC01897	G3N4A6
E	Sparus aurata	SPAAU23777	A0A671XGD0
E	Mola mola	MOLML28074	A0A3Q3W9H3
E	Tetraodon nigroviridis	TETNG15463	H3DLE5
E	Oryzias javanicus	ORYJA36806	ENSOJAG00000021077.1
E	Oryzias latipes	ORYLA01900	ENSORLG00000006525
E	Oryzias melastigma	ORYME27599	A0A3B3DP92
E	Cyprinodon variegatus	CYPVA30016	A0A3Q2DV62
E	Gambusia affinis	GAMAF31690	ENSGAFG00000019363.1
E	Poecilia formosa	POEFO12360	A0A087XJE9
E	Xiphophorus maculatus	XIPMA06089	M4AJD2
E	Astatotilapia calliptera	ASTCA22169	A0A3P8QJ92
E	Neolamprologus brichardi	NEOBR14478	A0A3Q4I378
E	Oreochromis niloticus	ORENI40674	A0A669EFE9
E	Amphilophus citrinellus	AMPCI30263	A0A3Q0S657
E	Amphiprion ocellaris	AMPOC16969	A0A3Q1AL07
E	Amphiprion percula	AMPPE26312	A0A3P8T6L1
E	Hippocampus comes	HIPCM19193	A0A3Q2Z6Y8
E	Esox lucius	ESOLU28476	A0A6Q2Y725
E	Salmo salar	SALSA35428	A0A1S3M1W6

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