Pairwise Orthologs for AMPCI30263

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene AMPCI30263 (A0A3Q0S657)

E Amphilophus citrinellus | Collagen, type XI, alpha 2

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)	KITSK04935		WP_014138212
			B	Deltaproteobacteria bacterium Zod_Metabat.937	U05DE00384		JXR83_18560
			E	Diacronema lutheri	DIALT14041		A0A8J5X4V9
			E	Passalora fulva	PASFU08289		scf7180000130545_G58
			E	Marssonina brunnea f. sp. multigermtubi (strain MB_m1)	MARBU07194		K1X0T8
			E	Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)	SCLS111180		A7EG23
			E	Colletotrichum sublineola	COLSU08003		A0A066X2S4
			E	Purpureocillium lilacinum	PURLI09604		A0A179GTZ7
			E	Coniophora puteana (strain RWD-64-598)	CONPW00301		A0A5M3N540
			E	Puccinia graminis	PUCGR06518		PGTT_03674
			E	Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL)	PUCGT20129		E3K093
			E	Seriola dumerili	SERDU32445		A0A3B4VMF6
			E	Echeneis naucrates	ECHNA19267		A0A665UXK2
			E	Cynoglossus semilaevis	CYNSE13467		A0A3P8X3Q6
			E	Scophthalmus maximus	SCOMX19176		ENSSMAG00000016118.1
			E	Gasterosteus aculeatus	GASAC01897		G3N4A6
			E	Sparus aurata	SPAAU23777		A0A671XGD0
			E	Mola mola	MOLML28074		A0A3Q3W9H3
			E	Takifugu rubripes	TAKRU06149		H2SLM8
			E	Oryzias javanicus	ORYJA36806		ENSOJAG00000021077.1
			E	Oryzias latipes	ORYLA01900		ENSORLG00000006525
			E	Oryzias melastigma	ORYME27599		A0A3B3DP92
			E	Kryptolebias marmoratus	KRYMA18510		A0A3Q3BQS9
			E	Cyprinodon variegatus	CYPVA30016		A0A3Q2DV62
			E	Gambusia affinis	GAMAF31690		ENSGAFG00000019363.1

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