OMA group 1032485 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1032485 with 15 members.

Fingerprint: QWTSSDQ | Dof zinc finger protein

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Members 15

Filter by Taxonomy:
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Eukaryota
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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Kalanchoe fedtschenkoi	KALFE30529	A0A7N0V005
E	Daucus carota subsp. sativus	DAUCS04022	A0A161XA60
E	Nicotiana tabacum	TOBAC58866	A0A1S4AEM6
E	Lotus japonicus	LOTJA30890	XP_057416964
E	Phaseolus angularis	PHAAN22633	A0A0L9TRI2
E	Manihot esculenta	MANES02875	A0A2C9VP18
E	Populus trichocarpa	POPTR05870	B9I2T1
E	Arabis alpina	ARAAL19932	A0A087GD95
E	Brassica rapa subsp. pekinensis	BRARP12378	M4D943
E	Brassica napus	BRANA10942	A0A816VUG9
E	Arabidopsis thaliana	ARATH39668	DOF54_ARATH
E	Eutrema salsugineum	EUTSA14347	V4MKA0
E	Theobroma cacao	THECC10831	A0A061FXE2
E	Gossypium hirsutum	GOSHI34316	A0A1U8NPW7
E	Gossypium raimondii	GOSRA29111	A0A0D2MM20

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