Pairwise Orthologs for DAUCS04022

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DAUCS04022 (A0A161XA60)

E Daucus carota subsp. sativus | Dof zinc finger protein

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Annona cherimola	ANNCH16684		Anche102Chr4g0028690
			E	Magnolia sinica	MAGSI27863		XP_058115198
			E	Aristolochia fimbriata	ARIFI08511		H6P81_008511
			E	Macleaya cordata	MACCD18622		A0A200R2I4
			E	Cynara cardunculus var. scolymus	CYNCS13523		A0A103XYQ4
			E	Coffea canephora	COFCA11175		A0A068TRH1
			E	Erythranthe guttata	ERYGU25057		A0A022Q6Q4
			E	Solanum lycopersicum	SOLLC25374		A0A3Q7HTR9
			E	Solanum tuberosum	SOLTU31777		M0ZXZ2
			E	Cucumis sativus	CUCSA00342		A0A0A0LSJ3
			E	Lotus japonicus	LOTJA30890		XP_057416964
			E	Cajanus cajan	CAJCA11187		A0A0K8K648
			E	Quercus lobata	QUELO37399		A0A7N2RC03
			E	Ricinus communis	RICCO10434		XP_002514602
			E	Cannabis sativa	CANSA16607		A0A7J6FGG8
			E	Prunus dulcis	PRUDU12001		A0A5E4F3Y0
			E	Prunus persica	PRUPE02681		M5WA03
			E	Rosa chinensis	ROSCH05608		A0A2P6P3B6
			E	Arabis alpina	ARAAL19932		A0A087GD95
			E	Brassica rapa subsp. pekinensis	BRARP12378		M4D943
			E	Arabidopsis lyrata	ARALY30704		scaffold_802724.1
			E	Arabidopsis thaliana	ARATH39668		DOF54_ARATH
			E	Eutrema salsugineum	EUTSA14347		V4MKA0
			E	Corchorus capsularis	COCAP26899		A0A1R3KZ69
			E	Vitis vinifera	VITVI13692		CBI15353

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