OMA group 1010095 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1010095 with 21 members.

Fingerprint: DNMNAEY | Ethylene-responsive transcription factor RAP2-11

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Members 21

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Beta vulgaris subsp. vulgaris	BETVV08224	BVRB_4g070980
E	Chenopodium quinoa	CHEQI20389	A0A803N5N6
E	Kalanchoe fedtschenkoi	KALFE38515	A0A7N0T928
E	Actinidia chinensis var. chinensis	ACTCC33094	A0A2R6PGH3
E	Nicotiana attenuata	NICAT01105	A0A1J6HV54
E	Nicotiana tabacum	TOBAC45762	A0A1S3Z1P6
E	Solanum lycopersicum	SOLLC07338	A0A3Q7E7F1
E	Quercus lobata	QUELO22980	A0A7N2KLH2
E	Ricinus communis	RICCO29022	XP_015582636
E	Populus trichocarpa	POPTR33044	B9GY71
E	Prunus dulcis	PRUDU13872	A0A4Y1RIZ2
E	Prunus persica	PRUPE14780	M5WFH4
E	Rosa chinensis	ROSCH33354	A0A2P6QNI2
E	Brassica rapa subsp. pekinensis	BRARP38219	M4CDI1
E	Arabidopsis lyrata	ARALY21720	scaffold_602074.1
E	Arabidopsis thaliana	ARATH34324	RA211_ARATH
E	Eutrema salsugineum	EUTSA05488	V4LHX7
E	Theobroma cacao	THECC27834	A0A061GS04
E	Gossypium hirsutum	GOSHI60998	Gh_D13G2199
E	Citrus clementina	CITCL10615	V4TEP9
E	Vitis vinifera	VITVI08070	D7SLK5

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