Pairwise Orthologs for VOLCA01209

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene VOLCA01209 (sbpA)

E Volvox carteri

‹

Loading, please wait...

Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)	PARP806311		WP_012405683
			E	Cyanidioschyzon merolae	CYAME04831		CMI196C
			E	Cyanidioschyzon merolae (strain 10D)	CYAM104406		M1VC60
			E	Porphyridium purpureum	PORPP09585		A0A5J4YRD3
			E	Chondrus crispus	CHOCR01514		A3QSS3
			E	Ichthyophthirius multifiliis	ICHMU01756		G0QVS9
			E	Ichthyophthirius multifiliis (strain G5)	ICHMG06299		G0QVS9
			E	Vitrella brassicaformis (strain CCMP3155)	VITBC05861		A0A0G4GUA4
			E	Bigelowiella natans (strain CCMP2755)	BIGNC13082		JGI_V11_49334
			E	Chlamydomonas reinhardtii	CHLRE12469		A0A2K3DY10
			E	Chlorella variabilis	CHLVA01805		E1Z6L2
			E	Klebsormidium flaccidum	KLEFL09831		KFL_000920210
			E	Klebsormidium nitens	KLENI11853		A0A0U9HUH0
			E	Chara braunii	CHABU30165		A0A388M393
			E	Marchantia polymorpha	MARPO10206		A3QSS2
			E	Ceratopteris richardii	CERRI13365		A0A8T2ULA7
			E	Marsilea vestita	MARVE07726		Mvestita_S13g01857.1
			E	Ginkgo biloba	GINBI01339		evm.TU.chr1.1339
			E	Picea glauca	PICGL20477		PGL00021055
			E	Picea sitchensis	PICSI06832		PSI00006828
			E	Pinus taeda	PINTA04217		PTA00067386
			E	Amborella trichopoda	AMBTC23242		W1NGG8
			E	Zostera marina	ZOSMR20765		A0A0K9NMR5
			E	Oryza brachyantha	ORYBR31252		J3KU21
			E	Oryza glaberrima	ORYGL16368		I1PJL5

Showing 1 to 25 of 25 rows rows per page