Pairwise Orthologs for VICPA08982

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene VICPA08982 (ENSVPAG00000005865)

E Vicugna pacos

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Lepisosteus oculatus	LEPOC02617		W5MTV7
			E	Latimeria chalumnae	LATCH01950		H2ZVW0
			E	Ornithorhynchus anatinus	ORNAN20827		A0A6I8NI84
			E	Tachyglossus aculeatus	TACAU04950		XP_038601141
			E	Loxodonta africana	LOXAF16456		G3SV87
			E	Oryctolagus cuniculus	RABIT09871		ENSOCUG00000000734.2
			E	Ochotona princeps	OCHPR03826		ENSOPRG00000000276
			E	Dipodomys ordii	DIPOR02732		A0A1S3EU57
			E	Heterocephalus glaber	HETGA13657		G5AP01
			E	Cavia aperea	CAVAP00063		ENSCAPG00000013830.1
			E	Cavia porcellus	CAVPO00057		A0A286XIL7
			E	Chinchilla lanigera	CHILA05579		A0A8C2UZS6
			E	Octodon degus	OCTDE18242		A0A6P3FL51
			E	Jaculus jaculus	JACJA14582		A0A8C5JYW5
			E	Cricetulus griseus	CRIGR12608		G3HKZ1
			E	Mus musculus	MOUSE15969		1433Z_MOUSE
			E	Rattus norvegicus	RATNO39105		1433Z_RAT
			E	Nannospalax galili	NANGA09148		A0A8C6QKN2
			E	Ictidomys tridecemlineatus	ICTTR09491		I3N206
			E	Cercocebus atys	CERAT23496		A0A2K5L5D2
			E	Chlorocebus sabaeus	CHLSB17307		A0A0D9RHV9
			E	Macaca fascicularis	MACFA41362		ENSMFAG00000001740.1
			E	Macaca mulatta	MACMU44503		A0A8J8XBY4
			E	Macaca nemestrina	MACNE11595		ENSMNEG00000041365.1
			E	Mandrillus leucophaeus	MANLE18679		A0A2K5YR93

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