Pairwise Orthologs for VICPA08845

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene VICPA08845 (ENSVPAG00000006674)

E Vicugna pacos

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Dictyostelium purpureum	DICPU09425		F0ZY42
			E	Sparus aurata	SPAAU16566		A0A671USH0
			E	Salarias fasciatus	SALFA32860		A0A672GB98
			E	Salmo salar	SALSA75039		A0A1S3NSH2
			E	Latimeria chalumnae	LATCH08945		H3AV68
			E	Ornithorhynchus anatinus	ORNAN10072		A0A6I8N1A3
			E	Tachyglossus aculeatus	TACAU19874		XP_038616062
			E	Procavia capensis	PROCA12804		ENSPCAG00000005846
			E	Loxodonta africana	LOXAF05278		G3UKX1
			E	Echinops telfairi	ECHTE10633		ENSETEG00000011665
			E	Oryctolagus cuniculus	RABIT17363		ENSOCUG00000008870.3
			E	Ochotona princeps	OCHPR11913		ENSOPRG00000013281
			E	Cricetulus griseus	CRIGR18380		ENSCGRG00000009139.1
			E	Mus musculus	MOUSE18496		BRWD1_MOUSE
			E	Rattus norvegicus	RATNO03899		D4AAI9
			E	Cercocebus atys	CERAT16393		A0A2K5KLL7
			E	Chlorocebus sabaeus	CHLSB08094		A0A0D9R7U4
			E	Macaca fascicularis	MACFA28431		ENSMFAG00000039942.1
			E	Macaca mulatta	MACMU30579		F7DH06
			E	Macaca nemestrina	MACNE05341		A0A2K6CWA0
			E	Mandrillus leucophaeus	MANLE15201		A0A2K6AEE4
			E	Papio anubis	PAPAN29994		A0A096NJ22
			E	Colobus angolensis palliatus	COLAP13075		A0A2K5IL33
			E	Rhinopithecus bieti	RHIBE12806		A0A2K6KBR9
			E	Rhinopithecus roxellana	RHIRO19644		A0A2K6P721

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