Pairwise Orthologs for TURTR13004

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TURTR13004 (ENSTTRG00000000596)

E Tursiops truncatus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804)	SAICN00092		A0A0E9N8W3
			E	Aspergillus calidoustus	ASPCI11313		A0A0U5G9K1
			E	Aspergillus tubingensis (strain CBS 134.48)	ASPTC04827		A0A1L9N3W6
			E	Petromyces alliaceus	PETAA09807		A0A5N6FJ85
			E	Epicoccum nigrum	EPING06709		A0A1Y2LZJ3
			E	Metarhizium rileyi (strain RCEF 4871)	METRR06827		A0A166ZP02
			E	Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)	CHAGB02633		Q2H9R6
			E	Pestalotiopsis fici (strain W106-1 / CGMCC3.15140)	PESFW11745		W3WR91
			E	Saccharomyces cerevisiae (strain FostersO)	YEASO00343		A0A6A5PSM4
			E	Thanatephorus cucumeris (strain AG1-IA)	THACA09526		L8WJ98
			E	Dichomitus squalens (strain LYAD-421)	DICSQ02383		XP_007362126
			E	Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064)	USTV105688		U5HE10
			E	Spizellomyces punctatus	SPIPN02095		SPPG_02206
			E	Spizellomyces punctatus (strain DAOM BR117)	SPIPD02339		A0A0L0HQ31
			E	Petromyzon marinus	PETMA04817		S4RCY3
			E	Eptatretus burgeri	EPTBU21041		A0A8C4WPF7
			E	Scyliorhinus torazame	SCYTO08753		A0A401PEH4
			E	Callorhinchus milii	CALMI46155		A0A4W3GCK7
			E	Lepisosteus oculatus	LEPOC02885		W5M3L3
			E	Anabas testudineus	ANATE23681		A0A7N6BCQ2
			E	Seriola dumerili	SERDU03235		A0A3B4UE74
			E	Echeneis naucrates	ECHNA13335		A0A665WFF6
			E	Cynoglossus semilaevis	CYNSE10583		A0A3P8UX72
			E	Scophthalmus maximus	SCOMX07356		ENSSMAG00000006356.1
			E	Dicentrarchus labrax	DICLA13296		XP_051260144

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