Pairwise Orthologs for TRYRA01069

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene TRYRA01069 (A0A3R7N141)

E Trypanosoma rangeli | Golgi family reassembly stacking protein (GRASP li

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma floridae	BRAFL39184		C3YYY0
			E	Callorhinchus milii	CALMI10280		V9KDY2
			E	Lepisosteus oculatus	LEPOC03138		W5MM78
			E	Anguilla anguilla	ANGAN11922		XP_035265824
			E	Anabas testudineus	ANATE27498		A0A7N6FF75
			E	Seriola dumerili	SERDU14016		A0A3B4TMN9
			E	Echeneis naucrates	ECHNA32690		A0A665U319
			E	Cynoglossus semilaevis	CYNSE18816		A0A3P8WX40
			E	Scophthalmus maximus	SCOMX29619		A0A2U9BLG3
			E	Dicentrarchus labrax	DICLA00450		A0A8C4DF36
			E	Sparus aurata	SPAAU36909		A0A671W264
			E	Takifugu rubripes	TAKRU32873		H2T522
			E	Tetraodon nigroviridis	TETNG05105		H3CR30
			E	Oryzias javanicus	ORYJA27916		A0A437CF22
			E	Oryzias melastigma	ORYME26009		A0A3B3BLM2
			E	Nothobranchius furzeri	NOTFU15401		A0A1A8ASC4
			E	Kryptolebias marmoratus	KRYMA13347		A0A3Q3A370
			E	Poecilia formosa	POEFO22092		A0A087XSP3
			E	Poecilia reticulata	POERE11547		A0A3P9N0K0
			E	Xiphophorus maculatus	XIPMA31390		A0A3B5R396
			E	Astatotilapia calliptera	ASTCA16787		A0A3P8Q3M5
			E	Neolamprologus brichardi	NEOBR06978		A0A3Q4H5H9
			E	Oreochromis aureus	OREAU40402		A0A668V5C3
			E	Oreochromis niloticus	ORENI27981		I3KQZ1
			E	Amphiprion ocellaris	AMPOC03345		A0A3Q1D555

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