Pairwise Orthologs for SYNS704096

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SYNS704096 (EDX87028)

B Synechococcus sp. (strain ATCC 29403 / PCC 7335)

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			B	Owenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801)	OWEHD02943		Oweho_3029
			B	Salinibacter ruber (strain M8)	SALRM00261		SRM_00261
			B	Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6)	SYNP201482		SYNPCC7002_A1508
			B	Cyanothece sp. (strain PCC 7425 / ATCC 29141)	CYAP403464		Cyan7425_3798
			B	Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24)	TRURR02663		WP_013179187
			B	Persicimonas caeni	PERCE02833		FIV42_14600
			B	Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24)	CORAD00390		WP_013042148
			E	Callorhinchus milii	CALMI35545		A0A4W3JVG3
			E	Lepisosteus oculatus	LEPOC12719		W5MUP7
			E	Echeneis naucrates	ECHNA29864		A0A665WNN8
			E	Cynoglossus semilaevis	CYNSE09169		A0A3P8UVV1
			E	Sparus aurata	SPAAU64872		A0A671XW89
			E	Mola mola	MOLML18954		A0A3Q3VUG9
			E	Kryptolebias marmoratus	KRYMA04788		A0A3Q3BL66
			E	Poecilia formosa	POEFO15768		A0A087YR96
			E	Salarias fasciatus	SALFA00864		A0A672GDB2
			E	Oreochromis aureus	OREAU36562		A0A668T484
			E	Oreochromis niloticus	ORENI47392		I3KYG4
			E	Amphiprion percula	AMPPE34188		A0A3P8S0A3
			E	Esox lucius	ESOLU15938		A0A3P9ADX8
			E	Salmo salar	SALSA123797		ENSSSAG00000109723.1
			E	Astyanax mexicanus	ASTMX18856		A0A8B9K6Z0
			E	Pygocentrus nattereri	PYGNA14958		A0A3B4C5Z8
			E	Tachyglossus aculeatus	TACAU04448		XP_038601238
			E	Procavia capensis	PROCA02582		ENSPCAG00000008061

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