Pairwise Orthologs for SPAAU68292

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SPAAU68292 (A0A671VCT5)

E Sparus aurata | Torsin family 3 member A [tor3a]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO07143		A0A401NNC3
			E	Callorhinchus milii	CALMI19223		V9KMN2
			E	Lepisosteus oculatus	LEPOC01683		W5MUA9
			E	Anguilla anguilla	ANGAN17388		XP_035272168
			E	Anabas testudineus	ANATE17302		A0A3Q1J1Y7
			E	Seriola dumerili	SERDU09034		A0A3B4T1Z7
			E	Echeneis naucrates	ECHNA35724		A0A665U1T0
			E	Cynoglossus semilaevis	CYNSE19797		A0A3P8W5G8
			E	Scophthalmus maximus	SCOMX04212		A0A2U9C2X5
			E	Dicentrarchus labrax	DICLA37300		XP_051233886
			E	Gasterosteus aculeatus	GASAC12638		G3PAH4
			E	Mola mola	MOLML03714		A0A3Q3XD96
			E	Takifugu rubripes	TAKRU27284		H2SHJ6
			E	Tetraodon nigroviridis	TETNG00845		H3DDH0
			E	Oryzias javanicus	ORYJA23706		ENSOJAG00000008460.1
			E	Oryzias latipes	ORYLA13645		ENSORLG00000017174
			E	Oryzias melastigma	ORYME15156		A0A3B3BUL2
			E	Nothobranchius furzeri	NOTFU26618		A0A1A8UYR5
			E	Kryptolebias marmoratus	KRYMA04076		A0A3Q3BIX1
			E	Cyprinodon variegatus	CYPVA02493		A0A3Q2DKC6
			E	Gambusia affinis	GAMAF13081		ENSGAFG00000014703.1
			E	Poecilia formosa	POEFO06670		A0A087XK19
			E	Poecilia reticulata	POERE26239		A0A3P9PZ90
			E	Xiphophorus maculatus	XIPMA35966		A0A3B5R8S9
			E	Salarias fasciatus	SALFA44067		A0A672I058

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