Pairwise Orthologs for SPAAU20002

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SPAAU20002 (A0A671VBZ8)

E Sparus aurata | G-protein coupled receptors family 1 profile domai

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Tachyglossus aculeatus	TACAU32477		XP_038598291
			E	Fukomys damarensis	FUKDA15935		A0A091DGD2
			E	Ceratotherium simum simum	CERSS14684		XP_004429232
			E	Dasypus novemcinctus	DASNO18407		ENSDNOG00000036377
			E	Dasypus novemcinctus	DASNO01848		ENSDNOG00000012143
			E	Dicentrarchus labrax	DICLA53563		A0A8P4KM33
			E	Oreochromis aureus	OREAU42895		A0A668RYI4
			E	Oreochromis niloticus	ORENI03572		I3J8K6
			E	Nomascus leucogenys	NOMLE09486		A0A2I3FPK6
			E	Seriola dumerili	SERDU26869		A0A3B4TPY4
			E	Seriola dumerili	SERDU33037		A0A3B4VQ78
			E	Amphilophus citrinellus	AMPCI26600		A0A3Q0QXG7
			E	Amphilophus citrinellus	AMPCI26599		A0A3Q0R1R6
			E	Esox lucius	ESOLU21347		A0A6Q2ZFS5
			E	Esox lucius	ESOLU21345		A0A6Q2YVL0
			E	Salmo trutta	SALTR20608		A0A674BPB4
			E	Salmo trutta	SALTR20607		A0A674BPP8
			E	Ictalurus punctatus	ICTPU12079		ENSIPUG00000009198.1
			E	Ictalurus punctatus	ICTPU12078		ENSIPUG00000009111.1
			E	Ictalurus punctatus	ICTPU12080		ENSIPUG00000009250.1
			E	Danio rerio	DANRE21512		Q32PT6
			E	Danio rerio	DANRE21562		ENSDARG00000106963.2
			E	Danio rerio	DANRE21486		Q90428
			E	Danio rerio	DANRE21495		Q9DFC7
			E	Danio rerio	DANRE21520		E9QFE0

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