Pairwise Orthologs for SINGR28713

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SINGR28713 (A0A672N9A4)

E Sinocyclocheilus grahami | Receptor-type tyrosine-protein phosphatase alpha-l [LOC107595709]

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Branchiostoma lanceolatum	BRALA05262		BL96546
			E	Eptatretus burgeri	EPTBU16917		A0A8C4QXB5
			E	Scyliorhinus torazame	SCYTO11338		A0A401NP48
			E	Chiloscyllium punctatum	CHIPU08389		A0A401SHY4
			E	Oryzias latipes	ORYLA07168		ENSORLG00000018046
			E	Poecilia reticulata	POERE26268		A0A3P9Q381
			E	Cavia aperea	CAVAP17084		ENSCAPG00000012258.1
			E	Vicugna pacos	VICPA08811		ENSVPAG00000002303
			E	Anas platyrhynchos	ANAPL11936		ENSAPLG00000004221
			E	Meleagris gallopavo	MELGA13455		ENSMGAG00000005455
			E	Phasianus colchicus	PHACC21630		A0A669QJ75
			E	Pseudonaja textilis	PSETE25981		A0A670ZG47
			E	Protobothrops mucrosquamatus	PROMU20637		XP_015683953
			E	Python bivittatus	PYTBI17691		A0A9F5IS68
			E	Bufo bufo	BUFBU37982		XP_040269189
			E	Pristionchus pacificus	PRIPA20784		WBGene00110572
			E	Caenorhabditis japonica	CAEJA03551		A0A8R1DJ95
			E	Brugia malayi	BRUMA07888		A0A0H5S4D1
			E	Loa loa	LOALO07474		A0A1S0TR14
			E	Onchocerca volvulus	ONCVO02221		WBGene00247344
			E	Strongyloides ratti	STRRB06312		A0A090L8V1
			E	Hyalella azteca	HYAAZ18658		A0A8B7PJB0
			E	Orchesella cincta	ORCCI18004		A0A1D2M6S2
			E	Drosophila sechellia	DROSE06121		B4I5F7
			E	Drosophila yakuba	DROYA03190		FBgn0230461

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