Pairwise Orthologs for SCOMX19937

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SCOMX19937 (ENSSMAG00000014358.1)

E Scophthalmus maximus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Scyliorhinus torazame	SCYTO08225		A0A401P7L7
			E	Chiloscyllium punctatum	CHIPU07412		A0A401SF71
			E	Lepisosteus oculatus	LEPOC02367		W5MFV9
			E	Anabas testudineus	ANATE05512		ENSATEG00000000830.1
			E	Seriola dumerili	SERDU08423		A0A3B4TN76
			E	Echeneis naucrates	ECHNA19903		A0A665W503
			E	Cynoglossus semilaevis	CYNSE13759		A0A3P8VZT5
			E	Dicentrarchus labrax	DICLA49592		A0A8C4EGW6
			E	Sparus aurata	SPAAU23858		A0A671XS08
			E	Mola mola	MOLML09284		A0A3Q3XJ73
			E	Takifugu rubripes	TAKRU05883		A0A3B5KFJ2
			E	Tetraodon nigroviridis	TETNG14356		H3DK58
			E	Oryzias javanicus	ORYJA35608		A0A437CVG0
			E	Oryzias latipes	ORYLA01805		ENSORLG00000004737
			E	Oryzias melastigma	ORYME26930		A0A3B3CET8
			E	Cyprinodon variegatus	CYPVA06703		A0A3Q2DXT1
			E	Salarias fasciatus	SALFA48540		A0A672GDP4
			E	Astatotilapia calliptera	ASTCA23052		A0A3P8N5Z7
			E	Haplochromis burtoni	HAPBU13496		A0A3Q2VWA5
			E	Neolamprologus brichardi	NEOBR07522		A0A3Q4GV43
			E	Oreochromis aureus	OREAU33450		A0A668VG32
			E	Oreochromis niloticus	ORENI41005		I3J9Z5
			E	Amphilophus citrinellus	AMPCI02601		A0A3Q0QV45
			E	Amphiprion ocellaris	AMPOC11385		A0A3Q1CPX3
			E	Amphiprion percula	AMPPE25841		A0A3P8TTK1

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