Pairwise Orthologs for SCOMX10055

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SCOMX10055 (ENSSMAG00000013225.1)

E Scophthalmus maximus

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Petromyzon marinus	PETMA09149		S4R5U8
			E	Echeneis naucrates	ECHNA26990		A0A665UFB4
			E	Gasterosteus aculeatus	GASAC13830		G3PID4
			E	Sparus aurata	SPAAU59092		A0A671WCD5
			E	Mola mola	MOLML14884		A0A3Q4BPC0
			E	Takifugu rubripes	TAKRU47374		A0A674PQW3
			E	Oryzias javanicus	ORYJA37501		ENSOJAG00000005536.1
			E	Oryzias latipes	ORYLA06107		ENSORLG00000016201
			E	Nothobranchius furzeri	NOTFU30433		mtf2
			E	Cyprinodon variegatus	CYPVA00011		A0A3Q2EHE0
			E	Poecilia formosa	POEFO17879		A0A087X641
			E	Astatotilapia calliptera	ASTCA04516		A0A3P8P7W3
			E	Neolamprologus brichardi	NEOBR21769		A0A3Q4MA35
			E	Amphilophus citrinellus	AMPCI01508		A0A3Q0QU60
			E	Amphiprion ocellaris	AMPOC12966		A0A3Q1BPV7
			E	Amphiprion percula	AMPPE02364		A0A3P8U6V1
			E	Hippocampus comes	HIPCM12753		A0A3Q2YUN7
			E	Gadus morhua	GADMO04373		A0A8C4Z5T2
			E	Esox lucius	ESOLU60840		A0A3P8ZZF0
			E	Astyanax mexicanus	ASTMX01857		ENSAMXG00000024614
			E	Pygocentrus nattereri	PYGNA17412		A0A3B4DCG2
			E	Electrophorus electricus	ELEEL09845		A0A4W4GXR4
			E	Danio rerio	DANRE10174		ENSDARG00000057439.7
			E	Ornithorhynchus anatinus	ORNAN00575		A0A6I8NUS4
			E	Tachyglossus aculeatus	TACAU32340		XP_038598112

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