Pairwise Orthologs for SALSA87253

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene SALSA87253 (ENSSSAG00000080356.2)

E Salmo salar

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Evidence			Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
Pair	HOG	OMA	Domains	Taxon	Protein ID	Relation type	Cross reference	Domain Architectures
			E	Lepisosteus oculatus	LEPOC00386	1:1	W5NN79
			E	Anguilla anguilla	ANGAN36183	1:1	XP_035235193
			E	Anabas testudineus	ANATE11721	1:1	ENSATEG00000017952.1
			E	Echeneis naucrates	ECHNA20738	1:1	A0A665T4P2
			E	Scophthalmus maximus	SCOMX32296	1:1	ENSSMAG00000001727.1
			E	Dicentrarchus labrax	DICLA28557	1:1	XP_051278646
			E	Sparus aurata	SPAAU14797	1:1	A0A671X7P7
			E	Takifugu rubripes	TAKRU30382	1:1	A0A674P9F7
			E	Oryzias javanicus	ORYJA44083	1:1	ENSOJAG00000021650.1
			E	Oryzias latipes	ORYLA17878	1:1	A6P6V7
			E	Nothobranchius furzeri	NOTFU27230	1:1	A0A9D2XCV6
			E	Gambusia affinis	GAMAF16893	1:1	ENSGAFG00000005581.1
			E	Poecilia formosa	POEFO08722	1:1	A0A096MCN2
			E	Poecilia reticulata	POERE33041	1:1	A0A3P9Q9F1
			E	Xiphophorus maculatus	XIPMA04091	1:1	A0A3B5QDQ2
			E	Salarias fasciatus	SALFA05837	1:1	A0A672F6C2
			E	Gadus morhua	GADMO05087	1:1	A0A8C5FVL4
			E	Salmo trutta	SALTR59170	1:1	A0A673ZJA0
			E	Astyanax mexicanus	ASTMX20571	1:1	A0A8T2LJZ5
			E	Latimeria chalumnae	LATCH07396		H3A2X9

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